Medical Microbiology

Research output

Research output per year 1986 2006 2008 2010 2011 2012 2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 2024

• 3413 Article
• 214 Review article
• 148 Comment/Letter to the editor
• 65 Editorial
• 159 More
  • 52 Chapter
  • 45 Phd-Thesis - Research and graduation internal
  • 21 Letter
  • 11 Erratum/Corrigendum
  • 7 Meeting Abstract
  • 6 Book editing
  • 5 Book
  • 5 Conference contribution
  • 2 Phd-Thesis - Research and graduation external
  • 1 Paper
  • 1 Short survey
  • 1 Other contribution
  • 1 Patent
  • 1 Preprint

Research output per year

Research output per year

Search results

• 2024

  Anelloviruses versus human immunity: how do we control these viruses?

  Timmerman, A. L., Schönert, A. L. M. & van der Hoek, L., Jan 2024, In: FEMS microbiology reviews. 48, 1, fuae005.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access

• A reference standard for urinary tract infection research: a multidisciplinary Delphi consensus study

  Bilsen, M. P., Conroy, S. P., Schneeberger, C., Platteel, T. N., van Nieuwkoop, C., Mody, L., Caterino, J. M., Geerlings, S. E., Köves, B., Wagenlehner, F., Kunneman, M., Visser, L. G., Lambregts, M. M. C. & UTI Reference Standard Consensus Group, 2024, (E-pub ahead of print) In: The Lancet Infectious Diseases.

  Research output: Contribution to journal › Review article › Academic › peer-review

• A systematic review identifying seminal plasma biomarkers and their predictive ability on IVF and ICSI outcomes

  van den Berg, J. S., Molina, N. M., Altmäe, S., Arends, B. & Steba, G. S., 1 Feb 2024, In: Reproductive BioMedicine Online. 48, 2, 103622.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access

• Next-generation bNAbs for HIV-1 cure strategies

  Schriek, A. I., Aldon, Y. L. T., van Gils, M. J. & de Taeye, S. W., 1 Feb 2024, In: Antiviral Research. 222, 105788.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
• 2023

  A CRISPR-Cas Cure for HIV/AIDS

  Hussein, M., Molina, M. A., Berkhout, B. & Herrera-Carrillo, E., 1 Jan 2023, In: International journal of molecular sciences. 24, 2, 1563.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  9 Citations (Scopus)

• Clinically relevant DNA viruses in pregnancy

  Linthorst, J., Welkers, M. R. A. & Sistermans, E. A., Apr 2023, In: Prenatal diagnosis. 43, 4, p. 457-466 10 p.

  Research output: Contribution to journal › Review article › Academic › peer-review

• Co-evolution of immunity and seasonal influenza viruses

  Han, A. X., de Jong, S. P. J. & Russell, C. A., Dec 2023, In: Nature Reviews Microbiology. 21, 12, p. 805-817 13 p.

  Research output: Contribution to journal › Review article › Academic › peer-review
  6 Citations (Scopus)

• Definitions of Urinary Tract Infection in Current Research: A Systematic Review

  Bilsen, M. P., Jongeneel, R. M. H., Schneeberger, C., Platteel, T. N., van Nieuwkoop, C., Mody, L., Caterino, J. M., Geerlings, S. E., Köves, B., Wagenlehner, F., Conroy, S. P., Visser, L. G. & Lambregts, M. M. C., 1 Jul 2023, In: Open forum infectious diseases. 10, 7, ofad332.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  8 Citations (Scopus)

• HIV persistence: silence or resistance?

  Pasternak, A. O. & Berkhout, B., 1 Apr 2023, In: Current opinion in virology. 59, 101301.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  8 Citations (Scopus)

• Leishmania Animal Models Used in Drug Discovery: A Systematic Review

  van der Ende, J. & Schallig, H. D. F. H., 1 May 2023, In: Animals. 13, 10, 1650.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  3 Citations (Scopus)

• Optimizing Antiviral Dosing for HSV and CMV Treatment in Immunocompromised Patients

  Huntjens, D. W., Dijkstra, J. A., Verwiel, L. N., Slijkhuis, M., Elbers, P., Welkers, M. R. A., Veldkamp, A. I., Kuijvenhoven, M. A., de Leeuw, D. C., Abdullah-Koolmees, H., Kuipers, M. T. & Bartelink, I. H., 1 Jan 2023, In: Pharmaceutics. 15, 1, 163.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  7 Citations (Scopus)

• Recent Advances Using Genetic Therapies Against Infectious Diseases and for Vaccination

  Galy, A., Berkhout, B., Breckpot, K., Pichon, C., Bloom, K., Kiem, H-P., Mühlebach, M. D. & McCune, J. M., 1 Sept 2023, In: Human gene therapy. 34, 17-18, p. 896-904 9 p.

  Research output: Contribution to journal › Review article › Academic › peer-review
  1 Citation (Scopus)

• The Cell-Free DNA Virome of 108,349 Dutch Pregnant Women

  Linthorst, J., Baksi, M. M. M., Welkers, M. R. A. & Sistermans, E. A., 1 Oct 2023, In: Obstetrical and Gynecological Survey. 78, 10, p. 566-567 2 p.

  Research output: Contribution to journal › Review article › Academic › peer-review

• Treatment of post-traumatic stress disorder in people with dementia: a structured literature review

  Ruisch, J. E., Nederstigt, A. H. M., van der Vorst, A., Boersma, S. N., Vink, M. T., Hoeboer, C. M., Olff, M. & Sobczak, S., May 2023, In: Psychogeriatrics. 23, 3, p. 523-534 12 p.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  2 Citations (Scopus)

• Update on the management of acute pancreatitis

  van den Berg, F. F. & Boermeester, M. A., 1 Apr 2023, In: Current Opinion in Critical Care. 29, 2, p. 145-151 7 p.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  6 Citations (Scopus)
• 2022

  Are national treatment guidelines for falciparum malaria in line with WHO recommendations and is antimalarial resistance taken into consideration? – A review of guidelines in non-endemic countries

  Visser, M. T., Zonneveld, R., Peto, T. J., van Vugt, M., Dondorp, A. M. & van der Pluijm, R. W., Feb 2022, In: Tropical Medicine & International Health. 27, 2, p. 129-136 8 p.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  5 Citations (Scopus)

• Clinically relevant DNA viruses in pregnancy

  Linthorst, J., Welkers, M. R. A. & Sistermans, E. A., 1 Mar 2022, (E-pub ahead of print) In: Prenatal diagnosis.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  4 Citations (Scopus)

• Clinical Pharmacokinetics of Gentamicin in Various Patient Populations and Consequences for Optimal Dosing for Gram-Negative Infections: An Updated Review

  Hodiamont, C. J., van den Broek, A. K., de Vroom, S. L., Prins, J. M., Mathôt, R. A. A. & van Hest, R. M., 1 Aug 2022, In: Clinical Pharmacokinetics. 61, 8, p. 1075-1094 20 p.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  14 Citations (Scopus)

• Cutaneous Leishmaniasis: A 2022 Updated Narrative Review into Diagnosis and Management Developments

  de Vries, H. J. C. & Schallig, H. D., 1 Nov 2022, In: American Journal of Clinical Dermatology. 23, 6, p. 823-840 18 p.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  38 Citations (Scopus)

• Historic and Prehistoric Epidemics: An Overview of Sources Available for the Study of Ancient Pathogens

  van der Kuyl, A. C., 1 Dec 2022, In: Epidemiologia. 3, 4, p. 443-464

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  2 Citations (Scopus)

• Human Brain Organoids as Models for Central Nervous System Viral Infection

  Depla, J. A., Mulder, L. A., de Sá, R. V., Wartel, M., Sridhar, A., Evers, M. M., Wolthers, K. C. & Pajkrt, D., 1 Mar 2022, In: Viruses. 14, 3, 634.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  18 Citations (Scopus)

• Optimization of Anti-SARS-CoV-2 Neutralizing Antibody Therapies: Roadmap to Improve Clinical Effectiveness and Implementation

  van der Straten, K., van Gils, M. J., de Taeye, S. W. & de Bree, G. J., 2022, In: Frontiers in Medical Technology. 4, p. 867982 13 p.

  Research output: Contribution to journal › Review article › Academic › peer-review

• Physician-Targeted Interventions in Antibiotic Prescribing for Urinary Tract Infections in General Practice: A Systematic Review

  Cox, S., Lo-A-Foe, K., van Hoof, M., Dinant, G-J., Oudhuis, G., Savelkoul, P., Cals, J. & de Bont, E., 1 Nov 2022, In: Antibiotics. 11, 11, 1560.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  4 Citations (Scopus)

• Respiratory Tract Infections in Diabetes – Lessons From Tuberculosis and Influenza to Guide Understanding of COVID-19 Severity

  Al-Sayyar, A., Hulme, K. D., Thibaut, R., Bayry, J., Sheedy, F. J., Short, K. R. & Alzaid, F., 26 Jul 2022, In: Frontiers in Endocrinology. 13, 919223.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  10 Citations (Scopus)

• SARS-CoV-2 Evolution: On the Sudden Appearance of the Omicron Variant

  Berkhout, B. & Herrera-Carrillo, E., 1 Apr 2022, In: Journal of Virology. 96, 7, e00090-22.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  34 Citations (Scopus)

• The carbon footprint of the operating room related to infection prevention measures: a scoping review

  Bolten, A., Kringos, D. S., Spijkerman, I. J. B. & Sperna Weiland, N. H., 1 Oct 2022, In: Journal of Hospital Infection. 128, p. 64-73 10 p.

  Research output: Contribution to journal › Review article › Academic › peer-review
  10 Citations (Scopus)

• The need for sexual health clinics, their future role, and contribution to public health

  Ramchandani, M. S., Bourne, C., Barbee, L. A., Hoornenborg, E., Pathela, P., Taylor, S. N. & de Vries, H., 23 Aug 2022, In: Sexual health. 19, 4, p. 346-356 11 p.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  3 Citations (Scopus)

• The Role of the Oral Immune System in Oropharyngeal Candidiasis-Facilitated Invasion and Dissemination of Staphylococcus aureus

  Pasman, R., Krom, B. P., Zaat, S. A. J. & Brul, S., 7 Apr 2022, In: Frontiers in oral health. 3, p. 851786 20 p., 851786.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  4 Citations (Scopus)

• Towards a molecular profile of antiretroviral therapy-free HIV remission

  Adams, P., Berkhout, B. & Pasternak, A. O., 1 Sept 2022, In: Current opinion in HIV and AIDS. 17, 5, p. 301-307 7 p.

  Research output: Contribution to journal › Review article › Academic › peer-review
  3 Citations (Scopus)
• 2021

  A Meta-analysis on the Role of Children in Severe Acute Respiratory Syndrome Coronavirus 2 in Household Transmission Clusters

  Zhu, Y., Bloxham, C. J., Hulme, K. D., Sinclair, J. E., Tong, Z. W. M., Steele, L. E., Noye, E. C., Lu, J., Xia, Y., Chew, K. Y., Pickering, J., Gilks, C., Bowen, A. C. & Short, K. R., 15 Jun 2021, In: Clinical Infectious Diseases. 72, 12, p. E1146-E1153

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  105 Citations (Scopus)

• Antimicrobial resistance among uropathogens in the Asia-Pacific region: a systematic review

  Sugianli, A. K., Ginting, F., Parwati, I., de Jong, M. D., van Leth, F. & Schultsz, C., 1 Mar 2021, In: JAC-antimicrobial resistance. 3, 1, p. dlab003 dlab003.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  16 Citations (Scopus)

• Assessing proviral competence: current approaches to evaluate HIV-1 persistence

  Cicilionytė, A., Berkhout, B. & Pasternak, A. O., 1 Jul 2021, In: Current opinion in HIV and AIDS. 16, 4, p. 223-231 9 p.

  Research output: Contribution to journal › Review article › Academic › peer-review
  6 Citations (Scopus)

• Dysregulated Inflammation During Obesity: Driving Disease Severity in Influenza Virus and SARS-CoV-2 Infections

  Hulme, K. D., Noye, E. C., Short, K. R. & Labzin, L. I., 28 Oct 2021, In: Frontiers in immunology. 12, 770066.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  24 Citations (Scopus)

• Mechanistic Drivers of Müllerian Duct Development and Differentiation Into the Oviduct

  Santana Gonzalez, L., Rota, I. A., Artibani, M., Morotti, M., Hu, Z., Wietek, N., Alsaadi, A., Albukhari, A., Sauka-Spengler, T. & Ahmed, A. A., 8 Mar 2021, In: Frontiers in cell and developmental biology. 9, 605301.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  20 Citations (Scopus)

• New epidemiological aspects of animal leishmaniosis in europe: The role of vertebrate hosts other than dogs

  Cardoso, L., Schallig, H., Persichetti, M. F. & Pennisi, M. G., 1 Mar 2021, In: Pathogens (Basel, Switzerland). 10, 3, 307.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  38 Citations (Scopus)

• Physiological and Pathological Inflammation Induced by Antibodies and Pentraxins

  Geyer, C. E., Mes, L., Newling, M., den Dunnen, J. & Hoepel, W., 12 May 2021, In: Cells. 10, 5, 1175.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  9 Citations (Scopus)

• Plant‐derived extracellular vesicles: Current findings, challenges, and future applications

  Kameli, N., Dragojlovic‐kerkache, A., Savelkoul, P. & Stassen, F. R., 1 Jun 2021, In: Membranes. 11, 6, 411.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  42 Citations (Scopus)

• Prognostic factors for severe and recurrent Clostridioides difficile infection: a systematic review

  van Rossen, T. M., Ooijevaar, R. E., Vandenbroucke-Grauls, C. M. J. E., Dekkers, O. M., Kuijper, E. J., Keller, J. J. & van Prehn, J., 2021, (E-pub ahead of print) In: Clinical Microbiology and Infection.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  20 Citations (Scopus)

• Safety and efficacy of allylamines in the treatment of cutaneous and mucocutaneous leishmaniasis: A systematic review

  Bezemer, J. M., van der Ende, J., Limpens, J., de Vries, H. J. C. & Schallig, H. D. F. H., Apr 2021, In: PLOS ONE. 16, 4 April, p. e0249628 e0249628.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  10 Citations (Scopus)

• Structure-guided envelope trimer design in HIV-1 vaccine development: a narrative review

  Derking, R. & Sanders, R. W., 1 Nov 2021, In: Journal of the International AIDS Society. 24, S7, e25797.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  24 Citations (Scopus)

• The splice of life: Does rna processing have a role in hiv-1 persistence?

  Pasternak, A. O. & Berkhout, B., 1 Sept 2021, In: Viruses. 13, 9, 1751.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  12 Citations (Scopus)

• World-Wide Prevalence and Genotype Distribution of Enteroviruses

  Brouwer, L., Moreni, G., Wolthers, K. C. & Pajkrt, D., 8 Mar 2021, In: Viruses. 13, 3, 434.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  46 Citations (Scopus)
• 2020

  A minimal common outcome measure set for COVID-19 clinical research

  Marshall, J. C., Murthy, S., Diaz, J., Adhikari, N., Angus, D. C., Arabi, Y. M., Baillie, K., Bauer, M., Berry, S., Blackwood, B., Bonten, M., Bozza, F., Brunkhorst, F., Cheng, A., Clarke, M., Dat, V. Q., de Jong, M., Denholm, J., Derde, L., Dunning, J., & 41 othersFeng, X., Fletcher, T., Foster, N., Fowler, R., Gobat, N., Gomersall, C., Gordon, A., Glueck, T., Harhay, M., Hodgson, C., Horby, P., Kim, Y., Kojan, R., Kumar, B., Laffey, J., Malvey, D., Martin-Loeches, I., McArthur, C., McAuley, D., McBride, S., McGuinness, S., Merson, L., Morpeth, S., Needham, D., Netea, M., Oh, M-D., Phyu, S., Piva, S., Qiu, R., Salisu-Kabara, H., Shi, L., Shimizu, N., Sinclair, J., Tong, S., Turgeon, A., Uyeki, T., van de Veerdonk, F., Webb, S., Williamson, P., Wolf, T. & Zhang, J., Aug 2020, In: Lancet infectious diseases. 20, 8, p. e192-e197

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  1049 Citations (Scopus)

• Asymptomatic vaginal Candida colonization and adverse pregnancy outcomes including preterm birth: a systematic review and meta-analysis

  Schuster, H. J., de Jonghe, B. A., Limpens, J., Budding, A. E. & Painter, R. C., 1 Aug 2020, In: American Journal of Obstetrics and Gynecology MFM. 2, 3, p. 100163 100163.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  10 Citations (Scopus)

• A test-negative design with additional population controls can be used to rapidly study causes of the SARS-COV-2 epidemic

  Vandenbroucke, J. P., Brickley, E. B., Vandenbroucke-Grauls, C. M. J. E. & Pearce, N., Nov 2020, In: Epidemiology. p. 836-843 8 p.

  Research output: Contribution to journal › Review article › Academic › peer-review
  44 Citations (Scopus)

• C-Type Lectin Receptors in Host Defense Against Bacterial Pathogens

  Mnich, M. E., van Dalen, R. & van Sorge, N. M., 7 Jul 2020, In: Frontiers in cellular and infection microbiology. 10, 309.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  57 Citations (Scopus)

• Current Concepts of Osteomyelitis: From Pathologic Mechanisms to Advanced Research Methods

  Hofstee, M. I., Muthukrishnan, G., Atkins, G. J., Riool, M., Thompson, K., Morgenstern, M., Stoddart, M. J., Richards, R. G., Zaat, S. A. J. & Moriarty, T. F., 1 Jun 2020, In: American journal of pathology. 190, 6, p. 1151-1163 13 p.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  63 Citations (Scopus)

• Detection of West Nile virus in a common whitethroat (Curruca communis) and Culex mosquitoes in the Netherlands, 2020

  Sikkema, R. S., Schrama, M., van den Berg, T., Morren, J., Munger, E., Krol, L., van der Beek, J. G., Blom, R., Chestakova, I., van der Linden, A., Boter, M., van Mastrigt, T., Molenkamp, R., Koenraadt, C. J., van den Brand, J. M., Oude Munnink, B. B., Koopmans, M. P. & van der Jeugd, H., 8 Oct 2020, In: Euro surveillance. 25, 40, p. 1-6 6 p.

  Research output: Contribution to journal › Review article › Academic › peer-review
  39 Citations (Scopus)

• Development of broadly reactive influenza vaccines by targeting the conserved regions of the hemagglutinin stem and head domains

  de Jong, N. M. C., Aartse, A., van Gils, M. J. & Eggink, D., 2 Jun 2020, In: Expert Review of Vaccines. 19, 6, p. 563-577 15 p.

  Research output: Contribution to journal › Review article › Academic › peer-review

  Open Access
  9 Citations (Scopus)

• Dientamoeba fragilis in children: a systematic review on diagnostic considerations and efficacy of treatment

  van Kalleveen, M. W., van Gool, T., Klarenbeek, N., Benninga, M. A., Savelkoul, P. H. M., de Meij, T. & Plötz, F. B., 2 Apr 2020, In: Expert review of gastroenterology and hepatology. 14, 4, p. 231-242 12 p.

  Research output: Contribution to journal › Review article › Academic › peer-review
  4 Citations (Scopus)