Pathology (Amsterdam UMC)

Research output

Research output per year 1977 2006 2007 2008 2009 2010 2011 2012 2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 2024

• 6357 Article
• 403 Review article
• 193 Comment/Letter to the editor
• 136 Chapter
• 316 More
  • 101 Meeting Abstract
  • 56 Phd-Thesis - Research and graduation internal
  • 49 Letter
  • 48 Editorial
  • 17 Conference contribution
  • 17 Erratum/Corrigendum
  • 7 Book
  • 5 Short survey
  • 2 Book editing
  • 2 Inaugural speech
  • 2 Foreword/postscript
  • 2 Paper
  • 2 Patent
  • 1 Report
  • 1 Abstract
  • 1 Poster
  • 1 Phd-Thesis - Research and graduation external
  • 1 Preprint
  • 1 Working paper

Research output per year

Research output per year

Search results

• 2023

  A Novel High-Throughput Framework to Quantify Spatio-Temporal Tumor Clonal Dynamics

  Baglamis, S., Saha, J., der Heijden, M. V., Miedema, D. M., van Gent, D., Krawczyk, P. M., Vermeulen, L. & Sheraton, V. M., 2023, International Conference on Computational Science. p. 345-359 15 p.

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Academic › peer-review

• Ex-vivo OCT on human bladder tissue after radical cystectomy with a newly designed MEMS based forward looking OCT probe

  Remmelink, M. J., Rip, Y., Bloemen, P. R., van den Elzen, R. M., Oddens, J. R., Nieuwenhuijzen, J. A., van der Voorn, J. P., van Leeuwen, T. G., de Reijke, T. M. & de Bruin, D. M., 2023, Translational Biophotonics: Diagnostics and Therapeutics III. Huang, Z. & Lilge, L. D. (eds.). SPIE, Vol. 12627. 126271Q. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 12627).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Academic › peer-review

• Fluorescence and Raman imaging of amyloid plaques reveals carotenoid accumulations

  Lochocki, B., Ettema, L., Hoozemans, J. J. M., De Boer, J. F. & Ariese, F., 11 Aug 2023, Translational Biophotonics: Diagnostics and Therapeutics III. Huang, Z. & Lilge, L. D. (eds.). SPIE, Vol. 12627. 126270C. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 12627).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Academic › peer-review

• Modeling Barrett’s Esophagus Progression Using Geometric Variational Autoencoders

  van Veldhuizen, V., Vadgama, S., de Boer, O., Meijer, S. & Bekkers, E. J., 2023, Cancer Prevention Through Early Detection - 2nd International Workshop, CaPTion 2023, Held in Conjunction with MICCAI 2023, Proceedings. Ali, S., van der Sommen, F., van Eijnatten, M., Kolenbrander, I., Papież, B. W. & Jin, Y. (eds.). Springer Science and Business Media Deutschland GmbH, Vol. 14295 LNCS. p. 132-142 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 14295 LNCS).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Academic › peer-review
• 2021

  Asbestos Destruction: European Proposals on Thermal, Chemical and Biological Processes

  Paglietti, F., Malinconico, S., Bellagamba, S. & Massaro, C., 2021, Asbestos and Other Elongate Mineral Particles�New and Continuing Challenges in the 21st Century. Millette, J. R. & Webber, J. S. (eds.). ASTM International, Vol. STP 1632. p. 304-326 (ASTM Special Technical Publication).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Academic › peer-review

• Multimodal imaging of snap-frozen AD human brain tissue

  Lochocki, B., Boon, B. D. C., Verheul, S. R., Zada, L., Hoozemans, J. J. M., Ariese, F. & de Boer, J. F., 2021, Translational Biophotonics: Diagnostics and Therapeutics: [Proceedings]. Huang, Z. & Lilge, L. D. (eds.). SPIE, Vol. 11919. 119190H. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Academic › peer-review

• Stimulated Raman Scattering Microscopy Reveals Silicone in Breast Tissue

  Schmidt, R. W., van Haasterecht, L., Zada, L., de Bakker, E., Barbé, E., Leslie, H. A., Vethaak, A. D., Gibbs, S., de Boer, J. F., Niessen, F. B., van Zuijlen, P. P. M., Groot, M. L. & Ariese, F., 2021, Translational Biophotonics: Diagnostics and Therapeutics. Huang, Z. & Lilge, L. D. (eds.). SPIE, Vol. 11919. 3 p. 119191S. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11919).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Academic › peer-review

• Translation of third and second harmonic generation microscopy into the clinic for the assessment of fresh lung tumor tissue

  van Huizen, L. M. G., Daniels, J. M. A., Radonic, T., van Mourik, F., Dickhoff, C., Bahce, I., Annema, J. T. & Groot, M. L., 2021, Translational Biophotonics: Diagnostics and Therapeutics. Huang, Z. & Lilge, L. D. (eds.). SPIE, Vol. 11919. 3 p. 1191910. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Academic › peer-review

• Translation of third and second harmonic generation microscopy into the clinic for the assessment of fresh lung tumor tissue

  van Huizen, L. M. G., Daniels, J. M. A., Radonic, T., van Mourik, F., Dickhoff, C., Bahce, I., Annema, J. T. & Groot, M. L., 2021, European Conferences on Biomedical Optics, ECBO 2021. The Optical Society, ETu5A.1. (Optics InfoBase Conference Papers).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Academic › peer-review
• 2019

  Bringing third and second harmonic generation microscopy into the clinic for the assessment of fresh lung tissue

  Van Huizen, L. M. G., Seinstra, D., Dickhoff, C., Radonic, T., Bahce, I., Van Mourik, F., Annema, J. T., Daniels, J. M. A., Van Boven, W. J. P. & Groot, M. L., 1 Jan 2019, Medical Laser Applications and Laser-Tissue Interactions IX. Lilge, L. D. & Philipp, C. M. (eds.). SPIE, Vol. 11079. 3 p. 110790J. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11079).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Academic › peer-review

  Open Access

• Cancer detection in mass spectrometry imaging data by dilated convolutional neural networks

  van Kersbergen, J., Ghazvinian Zanjani, F., Zinger, S., van der Sommen, F., Balluff, B., Vos, D. R. N., Ellis, S. R., Heeran, R. M. A., Lucas, M., Marquering, H. A., Jansen, I., Savci-Heijink, C. D., de Bruin, D. M. & de With, P. H. N., 1 Jan 2019, Medical Imaging 2019: Digital Pathology. Tomaszewski, J. E. & Ward, A. D. (eds.). SPIE, Vol. 10956. 109560I. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10956).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Academic › peer-review
  7 Citations (Scopus)

• Cancer detection in mass spectrometry imaging data by recurrent neural networks

  Zanjani, F. G., Panteli, A., Zinger, S., Sommen, F. V. D., Tan, T., Balluff, B., Vos, D. R. N., Ellis, S. R., Heeren, R. M. A., Lucas, M., Marquering, H. A., Jansen, I., Savci-Heijink, C. D., de Bruin, D. M. & de With, P. H. N., 2019, ISBI 2019 - 2019 IEEE International Symposium on Biomedical Imaging. IEEE Computer Society, Vol. 2019-April. p. 674-678 (Proceedings - International Symposium on Biomedical Imaging).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Academic › peer-review
  9 Citations (Scopus)

• Development of immunohistochemical triple staining method for the evaluation of different types of cell death in coronary thrombus

  Pertiwi, K. R., de Boer, O. J., Gabriels, P., MacKaaij, C. & van der Wal, A., 2019, International Seminar on Bioscience and Biological Education. Institute of Physics Publishing, Vol. 1241. 012013. (Journal of Physics: Conference Series).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Academic › peer-review

  Open Access
  1 Citation (Scopus)

• Identification of amyloid-beta (Aβ) plaques in freshly frozen human brain tissue using Raman spectroscopy

  Lochocki, B., Morrema, T. H. J., Ariese, F., Hoozemans, J. J. M. & De Boer, J. F., 1 Jan 2019, Clinical and Preclinical Optical Diagnostics II. Brown, J. Q. & van Leeuwen, T. G. (eds.). SPIE, Vol. 11073. 1107302. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11073).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Academic › peer-review
  1 Citation (Scopus)

• Stain-Transforming Cycle-Consistent Generative Adversarial Networks for Improved Segmentation of Renal Histopathology

  de Bel, T., Hermsen, M., Kers, J., van der Laak, J. & Litjens, G., 2019, Proceedings of the 2nd International Conference on Medical Imaging with Deep Learning, MIDL 2019. Cardoso, M. J., Feragen, A., Glocker, B., Konukoglu, E., Oguz, I., Unal, G. & Vercauteren, T. (eds.). ML Research Press, Vol. 102. p. 151-163 (Proceedings of Machine Learning Research).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Academic › peer-review

  48 Citations (Scopus)
• 2018

  Indoleamine 2, 3 Dioxygenase Activity Aggravates the Course and Pathology of Murine Tuberculosis

  Guo, L., van der Sluijs, K. F. F., van der Windt, G. J. W., Kager, L. M., Baban, B., van der Loos, C. M., Dekker, T., Florquin, S., W. Wieland, C., Mellor, A., Poll, T. V. D., Jan Sterk, P. & Lutter, R., 2018, .. American Journal of Respiratory and Critical Care Medicine: American Thoracic Society

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Academic › peer-review
• 2008

  Tissue around catheters is a niche for bacteria associated with medical device infection

  Zaat, S. A. J., Broekhuizen, C. A. N., Schultz, M. J., Van Der Wal, A. C., Boszhard, L. & Vandenbroucke-Grauls, C. M. J. E., 2008, 8th World Biomaterials Congress 2008. p. 1742 1 p. (8th World Biomaterials Congress 2008; vol. 3).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Academic › peer-review