Projects per year
Personal profile
Research interests
Our Autophagy-directed Immunity (ADI) research group focuses on elucidating the mechanisms governing autophagy pathways, ultimately aiming to maximize the therapeutic potential of targeting autophagy to intervene in chronic viral infections and inflammatory diseases. Autophagy pathways are not only endowed with the capacity to degrade viruses and instruct adaptive T cell-mediated responses, but also to mediate the release of cytosolic contents extracellularly and thereby control inflammatory output. We use both hypothesis-driven as well as unbiased genome-wide and proteomics approaches to define novel regulators and signalling components of autophagy pathways. In this context, we have recently discovered an important role for autophagy in restricting HIV-1 infection through a novel TRIM5α-Atg16L1-Atg5 mechanism. Currently, we are investigating the impact of the TRIM5α-mediated autophagy pathway on HIV-1 disease progression and inflammatory signatures.
Our major research lines are:
- Molecular Regulation of Degradative Autophagy and Secretory Autophagy in Viral Infections, with particular emphasis on HIV-1 and Dengue virus infection.
- Function of Autophagy Molecules and Autophagy Vesicles on Virus Restriction, Molecular Inflammation and T-cell mediated Immunity - using organoid technology and ex vivo explant tissue models.
- Impact of Autophagy Mechanisms and Polymorphisms on Clinical Disease Outcomes
Current members:
- Renée RCE Schreurs - Postdoctoral fellow
- Alexandra PM Cloherty - PhD candidate
- Tracy-Jane THD Eisden - PhD candidate [Alliance AMC-VUmc joint project]
For any enquiries, please contact: [email protected]
specialisation
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
Collaborations and top research areas from the last five years
Projects
- 1 Active
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Geijtenbeek T.B.H.: C-type lectins in infection and immunity
Geijtenbeek, T., Bouwman-Gringhuis, S., van Leeuwen, E., Ribeiro, C., Kaptein, T., Zijlstra - Willems, E., Eisden, T. J., Hahnlein, J., Kruize, Z., Mason, L., Nijmeijer, B., van der Poel, M., Sarrami, R., Sprokholt, J. & van Teijlingen, N.
1/06/2009 → …
Project: Research
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Autophagy-enhancing ATG16L1 polymorphism is associated with improved clinical outcome and T-cell immunity in chronic HIV-1 infection
Schreurs, R. R. C. E., Koulis, A., Booiman, T., Boeser-Nunnink, B., Cloherty, A. P. M., Rader, A. G., Patel, K. S., Kootstra, N. A. & Ribeiro, C. M. S., 1 Dec 2024, In: Nature communications. 15, 1, 2465.Research output: Contribution to journal › Article › Academic › peer-review
Open Access1 Citation (Scopus) -
Berbamine suppresses intestinal SARS-CoV-2 infection via a BNIP3-dependent autophagy blockade
Cloherty, A. P. M., Rader, A. G., Patel, K. S., Pérez-Vargas, J., Thompson, C. A. H., Ennis, S., Niikura, M., Wildenberg, M. E., Muncan, V., Schreurs, R. R. C. E., Jean, F. & Ribeiro, C. M. S., 1 Dec 2023, In: Emerging Microbes & Infections. 12, 1, p. 2195020 2195020.Research output: Contribution to journal › Article › Academic › peer-review
Open Access6 Citations (Scopus) -
Immune activation of vaginal human Langerhans cells increases susceptibility to HIV-1 infection
van Teijlingen, N. H., Eder, J., Sarrami-Forooshani, R., Zijlstra-Willems, E. M., Roovers, J-P. W. R., van Leeuwen, E., Ribeiro, C. M. S. & Geijtenbeek, T. B. H., 1 Dec 2023, In: Scientific reports. 13, 1, 3283.Research output: Contribution to journal › Article › Academic › peer-review
Open Access4 Citations (Scopus) -
Vaginal bacterium Prevotella timonensis turns protective Langerhans cells into HIV-1 reservoirs for virus dissemination
van Teijlingen, N. H., Helgers, L. C., Sarrami-Forooshani, R., Zijlstra-Willems, E. M., van Hamme, J. L., Segui-Perez, C., van Smoorenburg, M. Y., Borgdorff, H., van de Wijgert, J. H. HM., van Leeuwen, E., van der Post, J. A. M., Strijbis, K., Ribeiro, C. M. S. & Geijtenbeek, T. B. H., 4 Oct 2022, In: EMBO Journal. 41, 19, e110629.Research output: Contribution to journal › Article › Academic › peer-review
Open Access5 Citations (Scopus) -
Autophagy-enhancing drugs limit mucosal HIV-1 acquisition and suppress viral replication ex vivo
Cloherty, A. P. M., van Teijlingen, N. H., Eisden, T-J. T. H. D., van Hamme, J. L., Rader, A. G., Geijtenbeek, T. B. H., Schreurs, R. R. C. E. & Ribeiro, C. M. S., 1 Dec 2021, In: Scientific reports. 11, 1, 4767.Research output: Contribution to journal › Article › Academic › peer-review
Open Access15 Citations (Scopus)
Datasets
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Berbamine suppresses intestinal SARS-CoV-2 infection via a BNIP3-dependent autophagy blockade
Cloherty, A. (Creator), Rader, A. (Creator), Patel, K. S. (Creator), Pérez-Vargas, J. (Creator), Thompson, C. A. H. (Creator), Ennis, S. (Creator), Niikura, M. (Creator), Wildenberg, M. (Creator), Dijkstra - Muncan, V. (Creator), Schreurs, R. (Creator), Jean, F. (Creator) & Ribeiro, C. (Creator), Taylor & Francis, 2023
DOI: 10.6084/m9.figshare.22323729, https://tandf.figshare.com/articles/dataset/Berbamine_suppresses_intestinal_SARS-CoV-2_infection_via_a_BNIP3-dependent_autophagy_blockade/22323729
Dataset
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Berbamine suppresses intestinal SARS-CoV-2 infection via a BNIP3-dependent autophagy blockade
Cloherty, A. (Creator), Rader, A. (Creator), Patel, K. S. (Creator), Pérez-Vargas, J. (Creator), Thompson, C. A. H. (Creator), Ennis, S. (Creator), Niikura, M. (Creator), Wildenberg, M. (Creator), Dijkstra - Muncan, V. (Creator), Schreurs, R. (Creator), Jean, F. (Creator) & Ribeiro, C. (Creator), Taylor & Francis, 2023
DOI: 10.6084/m9.figshare.22323729.v2, https://tandf.figshare.com/articles/dataset/Berbamine_suppresses_intestinal_SARS-CoV-2_infection_via_a_BNIP3-dependent_autophagy_blockade/22323729/2
Dataset