Colin Russell

Research output

Research output per year 2010 2020 2022 2023 2024

• 43 Article
• 2 Review article
• 1 Comment/Letter to the editor
• 1 Editorial

Research output per year

Research output per year

Search results

• 2024

  Host and viral determinants of airborne transmission of SARS-CoV-2 in the Syrian hamster

  Port, J. R., Morris, D. H., Riopelle, J. C., Yinda, C. K., Avanzato, V. A., Holbrook, M. G., Bushmaker, T., Schulz, J. E., Saturday, T. A., Barbian, K., Russell, C. A., Perry-Gottschalk, R., Shaia, C., Martens, C., Lloyd-Smith, J. O., Fischer, R. J. & Munster, V. J., 28 Feb 2024, In: eLife. 13, RP87094.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  2 Citations (Scopus)

• Immunostimulatory Effect of Flagellin on MDR-Klebsiella-Infected Human Airway Epithelial Cells

  van Linge, C. C. A., Hulme, K. D., Peters-Sengers, H., Sirard, J-C., Goessens, W. H. F., de Jong, M. D., Russell, C. A., de Vos, A. F. & van der Poll, T., 1 Jan 2024, In: International journal of molecular sciences. 25, 1, 309.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

• Impact and cost-effectiveness of SARS-CoV-2 self-testing strategies in schools: A multicountry modelling analysis

  Chevalier, J. M., Han, A. X., Hansen, M. A., Klock, E., Pandithakoralage, H., Ockhuisen, T., Girdwood, S. J., Lekodeba, N. A., de Nooy, A., Khan, S., Johnson, C. C., Sacks, J. A., Jenkins, H. E., Russell, C. A. & Nichols, B. E., 27 Feb 2024, In: BMJ Open. 14, 2

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
• 2023

  A modelling framework for translating discrete choice experiment results into cost-effectiveness estimates: an application to designing tailored and scalable HIV and contraceptive services for adolescents in Gauteng, South Africa

  Govathson, C., Long, L. C., Russell, C. A., Moolla, A., Pascoe, S. & Nichols, B. E., 1 Jul 2023, In: Journal of the International AIDS Society. 26, 7, e26124.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

• Co-evolution of immunity and seasonal influenza viruses

  Han, A. X., de Jong, S. P. J. & Russell, C. A., Dec 2023, In: Nature Reviews Microbiology. 21, 12, p. 805-817 13 p.

  Research output: Contribution to journal › Review article › Academic › peer-review
  5 Citations (Scopus)

• Determinants of epidemic size and the impacts of lulls in seasonal influenza virus circulation

  de Jong, S. P. J., Felix Garza, Z. C., Gibson, J. C., van Leeuwen, S., de Vries, R. P., Boons, G-J., van Hoesel, M., de Haan, K., van Groeningen, L. E., Hulme, K. D., van Willigen, H. D. G., Wynberg, E., de Bree, G. J., Matser, A., Bakker, M., van der Hoek, L., Prins, M., Kootstra, N. A., Eggink, D., Nichols, B. E., & 3 othersHan, A. X., de Jong, M. D. & Russell, C. A., Dec 2023, In: Nature communications. 15, 1, p. 591 591.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

• Estimating the potential impact and diagnostic requirements for SARS-CoV-2 test-and-treat programs

  Han, A. X., Hannay, E., Carmona, S., Rodriguez, B., Nichols, B. E. & Russell, C. A., 1 Dec 2023, In: Nature communications. 14, 1, 7981.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access

• Mutual information networks reveal evolutionary relationships within the influenza A virus polymerase

  Arcos, S., Han, A. X., te Velthuis, A. J. W., Russell, C. A. & Lauring, A. S., 2023, In: Virus evolution. 9, 1, vead037.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  1 Citation (Scopus)

• SARS-CoV-2 diagnostic testing rates determine the sensitivity of genomic surveillance programs

  Han, A. X., Toporowski, A., Sacks, J. A., Perkins, M. D., Briand, S., van Kerkhove, M., Hannay, E., Carmona, S., Rodriguez, B., Parker, E., Nichols, B. E. & Russell, C. A., Jan 2023, In: Nature Genetics. 55, 1, p. 26-33 8 p.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  12 Citations (Scopus)

• Strategies for Using Antigen Rapid Diagnostic Tests to Reduce Transmission of Severe Acute Respiratory Syndrome Coronavirus 2 in Low- and Middle-Income Countries: A Mathematical Modelling Study Applied to Zambia

  Han, A. X., Girdwood, S. J., Khan, S., Sacks, J. A., Toporowski, A., Huq, N., Hannay, E., Russell, C. A. & Nichols, B. E., 15 Feb 2023, In: Clinical Infectious Diseases. 76, 4, p. 620-630 11 p.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  7 Citations (Scopus)
• 2022

  Antigenic cartography using sera from sequence-confirmed SARS-CoV-2 variants of concern infections reveals antigenic divergence of Omicron

  van der Straten, K., Guerra, D., van Gils, M. J., Bontjer, I., Caniels, T. G., van Willigen, H. D. G., Wynberg, E., Poniman, M., Burger, J. A., Bouhuijs, J. H., van Rijswijk, J., Olijhoek, W., Liesdek, M. H., Lavell, A. H. A., Appelman, B., Sikkens, J. J., Bomers, M. K., Han, A. X., Nichols, B. E., Prins, M., & 7 othersVennema, H., Reusken, C., de Jong, M. D., de Bree, G. J., Russell, C. A., Eggink, D. & Sanders, R. W., 13 Sept 2022, In: Immunity. 55, 9, p. 1725-1731.e4

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  39 Citations (Scopus)

• A single mRNA vaccine dose in COVID-19 patients boosts neutralizing antibodies against SARS-CoV-2 and variants of concern

  RECoVERED Study Group, 18 Jan 2022, In: Cell Reports Medicine. 3, 1, 100486.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  13 Citations (Scopus)

• ChAdOx1 nCoV-19 (AZD1222) or nCoV-19-Beta (AZD2816) protect Syrian hamsters against Beta Delta and Omicron variants

  van Doremalen, N., Schulz, J. E., Adney, D. R., Saturday, T. A., Fischer, R. J., Yinda, C. K., Thakur, N., Newman, J., Ulaszewska, M., Belij-Rammerstorfer, S., Saturday, G., Spencer, A. J., Bailey, D., Russell, C. A., Gilbert, S. C., Lambe, T. & Munster, V. J., 1 Dec 2022, In: Nature communications. 13, 1, 4610.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  16 Citations (Scopus)

• Epidemiologic and Genomic Analysis of SARS-CoV-2 Delta Variant Superspreading Event in Nightclub, the Netherlands, June 2021

  ARGOS consortium, 1 May 2022, In: Emerging infectious diseases. 28, 5, p. 1012-1016 5 p.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  6 Citations (Scopus)

• Facility-based HIV self-testing strategies may substantially and cost-effectively increase the number of men and youth tested for HIV in Malawi: results from an individual-based mathematical model

  Nichols, B. E., de Nooy, A., Benade, M., Balakasi, K., Mphande, M., Rao, G., Claassen, C. W., Khan, S., Stillson, C., Russell, C. A., Doi, N. & Dovel, K., 1 Oct 2022, In: Journal of the International AIDS Society. 25, 10, p. e26020 e26020.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  4 Citations (Scopus)

• N-Glycolylneuraminic Acid Binding of Avian and Equine H7 Influenza A Viruses

  Spruit, C. M., Zhu, X., Tomris, I., Ríos-Carrasco, M., Han, A. X., Broszeit, F., van der Woude, R., Bouwman, K. M., Luu, M. M. T., Matsuno, K., Sakoda, Y., Russell, C. A., Wilson, I. A., Boons, G-J. & de Vries, R. P., 1 Mar 2022, In: Journal of Virology. 96, 5, e02120-21.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  8 Citations (Scopus)

• Potential impacts of prolonged absence of influenza virus circulation on subsequent epidemics

  de Jong, S. P. J., Felix Garza, Z. C., Gibson, J. C., Han, A. X., van Leeuwen, S., de Vries, R. P., Boons, G-J., van Hoesel, M., de Haan, K., van Groeningen, L. E., Hulme, K. D., van Willigen, H. D. G., Wynberg, E., de Bree, G. J., Matser, A., Bakker, M., van der Hoek, L., Prins, M., Kootstra, N. A., Eggink, D., & 3 othersNichols, B. E., de Jong, M. D. & Russell, C. A., 16 Nov 2022, In: medRxiv.

  Research output: Contribution to journal › Article › Academic › peer-review

• Regional importation and asymmetric within-country spread of SARS-CoV-2 variants of concern in the Netherlands

  RIVM COVID-19 molecular epidemiology group, 13 Sept 2022, In: eLife. 11, e78770.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  7 Citations (Scopus)

• Relative cost-effectiveness of long-acting injectable cabotegravir versus oral pre-exposure prophylaxis in South Africa based on the HPTN 083 and HPTN 084 trials: a modelled economic evaluation and threshold analysis

  Jamieson, L., Johnson, L. F., Nichols, B. E., Delany-Moretlwe, S., Hosseinipour, M. C., Russell, C. & Meyer-Rath, G., 1 Dec 2022, In: The Lancet HIV. 9, 12, p. e857-e867

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  16 Citations (Scopus)

• Severe Fatigue in the First Year Following SARS-CoV-2 Infection: A Prospective Cohort Study

  Verveen, A., Wynberg, E., van Willigen, H. D. G., Boyd, A., de Jong, M. D., de Bree, G., Davidovich, U., Lok, A., Moll van Charante, E. P., Knoop, H., Prins, M., Nieuwkerk, P., Agard, I., Ayal, J., Cavdar, F., Craanen, M., Deuring, A., van Dijk, A., Ersan, E., del Grande, L., & 36 othersHartman, J., Koedoot, N., Leenstra, T., Lebbink, R., Loomans, D., Makowska, A., du Maine, T., de Man, I., Matser, A., van der Meij, L., van Polanen, M., Oud, M., Reid, C., Storey, L., van Wijk, M., van den Aardweg, J., van Assem, J., van Beek, M., Blankert, T., Dijkstra, M., Figaroa, O., Frenkel, L., van Gils, M., van Haga, J., Han, X., Harskamp-Holwerda, A., Hazenberg, M., Hidad, S., de Jong, N., Kootstra, N., Kuijt, L., Russell, C., van der Straten, K., van der Veen, A., Verkaik, B. & Visser, G-R., 1 May 2022, In: Open forum infectious diseases. 9, 5, ofac127.

  Research output: Contribution to journal › Article › Academic › peer-review
  14 Citations (Scopus)

• The effect of SARS-CoV-2 vaccination on post-acute sequelae of COVID-19 (PASC): A prospective cohort study

  the RECoVERED Study Group, 30 Jul 2022, In: Vaccine. 40, 32, p. 4424-4431 8 p.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  32 Citations (Scopus)

• The Glycan Hole Area of HIV-1 Envelope Trimers Contributes Prominently to the Induction of Autologous Neutralization

  Schorcht, A., Cottrell, C. A., Pugach, P., Ringe, R. P., Han, A. X., Allen, J. D., van den Kerkhof, T. L. G. M., Seabright, G. E., Schermer, E. E., Ketas, T. J., Burger, J. A., van Schooten, J., LaBranche, C. C., Ozorowski, G., de Val, N., Bader, D. L. V., Schuitemaker, H., Russell, C. A., Montefiori, D. C., van Gils, M. J., & 5 othersCrispin, M., Klasse, P. J., Ward, A. B., Moore, J. P. & Sanders, R. W., 1 Jan 2022, In: Journal of Virology. 96, 1, e01552-21.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  10 Citations (Scopus)
• 2021

  Hepatitis C Virus Transmission Among Men Who Have Sex With Men in Amsterdam: External Introductions May Complicate Microelimination Efforts

  Koopsen, J., Parker, E., Han, A. X., van de Laar, T., Russell, C., Hoornenborg, E., Prins, M., van der Valk, M. & Schinkel, J., 15 Jun 2021, In: Clinical Infectious Diseases. 72, 12, p. e1056-e1063

  Research output: Contribution to journal › Article › Academic › peer-review
  9 Citations (Scopus)

• Partial immunity and SARS-CoV-2 mutations

  Hanage, W. P. & Russell, C. A., 23 Apr 2021, In: Science. 372, 6540, p. 354 1 p.

  Research output: Contribution to journal › Comment/Letter to the editor › Academic

  Open Access
  5 Citations (Scopus)

• Serologic Surveillance and Phylogenetic Analysis of SARS-CoV-2 Infection among Hospital Health Care Workers

  Sikkens, J. J., Buis, D. T. P., Peters, E. J. G., Dekker, M., Schinkel, M., Reijnders, T. D. Y., Schuurman, A. R., de Brabander, J., Lavell, A. H. A., Maas, J. J., Koopsen, J., Han, A. X., Russell, C. A., Schinkel, J., Jonges, M., Matamoros, S. B., Jurriaans, S., van Mansfeld, R., Wiersinga, W. J., Smulders, Y. M., & 2 othersde Jong, M. D. & Bomers, M. K., 28 Jul 2021, In: JAMA network open. 4, 7, p. e2118554 18554.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  27 Citations (Scopus)

• Within-host evolutionary dynamics of seasonal and pandemic human influenza a viruses in young children

  Han, A. X., Garza, Z. C. F., Welkers, M. R. A., Vigeveno, R. M., Duong, T. N., Mai, L. T. Q., Thai, P. Q., Thoang, D. D., Anh, T. T. N., Tuan, H. M., Hung, N. T., Thinh, L. Q., Hai, L. T., Ngoc, H. T. B., Chokephaibulkit, K., Puthavathana, P., Chau, N. V. V., Ngoc, N. M., van Kinh, N., Trinh, D. T., & 8 othersHien, T. T., Wertheim, H. F. L., Horby, P., Fox, A., van Doorn, H. R., Eggink, D., de Jong, M. D. & Russell, C. A., 2021, In: eLife. 10

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  4 Citations (Scopus)
• 2020

  Asynchrony between virus diversity and antibody selection limits influenza virus evolution

  Morris, D. H., Petrova, V. N., Rossine, F. W., Parker, E., Grenfell, B. T., Neher, R. A., Levin, S. A. & Russell, C. A., 1 Oct 2020, In: eLife. 9, p. 1-62 62 p., e62105.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  22 Citations (Scopus)

• Genotypic diversity and dynamic nomenclature of Parechovirus A

  Parker, E., Han, A., Brouwer, L., Wolthers, K., Benschop, K. & Russell, C. A., 2020, In: bioRxiv.

  Research output: Contribution to journal › Article › Academic

• Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020

  The WHO European Region sequencing laboratories and GISAID EpiCoV group, 2020, In: Euro surveillance. 25, 32, 2001410.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  143 Citations (Scopus)

• N-glycolylneuraminic acid binding of avian H7 influenza A viruses

  Spruit, C. M., Zhu, X., Broszeit, F., Han, A. X., van der Woude, R., Bouwman, K. M., Luu, M. M. T., Russell, C. A., Wilson, I. A., Boons, G-J. & de Vries, R. P., 2020, In: bioRxiv.

  Research output: Contribution to journal › Article › Academic

• Outbreak Severity of Highly Pathogenic Avian Influenza A(H5N8) Viruses Is Inversely Correlated to Polymerase Complex Activity and Interferon Induction

  Vigeveno, R. M., Poen, M. J., Parker, E., Holwerda, M., de Haan, K., van Montfort, T., Lewis, N. S., Russell, C. A., Fouchier, R. A. M., de Jong, M. D. & Eggink, D., 1 Jun 2020, In: Journal of Virology. 94, 11, e00375-20.

  Research output: Contribution to journal › Article › Academic › peer-review
  11 Citations (Scopus)

• Phenotypic Effects of Substitutions within the Receptor Binding Site of Highly Pathogenic Avian Influenza H5N1 Virus Observed during Human Infection

  Eggink, D., Spronken, M., van der Woude, R., Buzink, J., Broszeit, F., McBride, R., Pawestri, H. A., Setiawaty, V., Paulson, J. C., Boons, G-J., Fouchier, R. A. M., Russell, C. A., de Jong, M. D. & de Vries, R. P., 16 Jun 2020, In: Journal of Virology. 94, 13

  Research output: Contribution to journal › Article › Academic › peer-review
  7 Citations (Scopus)

• Quantifying mechanistic traits of influenza viral dynamics using in vitro data

  Yan, A. W. C., Zhou, J., Beauchemin, C. A. A., Russell, C. A., Barclay, W. S. & Riley, S., 1 Dec 2020, In: Epidemics. 33, 100406.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  9 Citations (Scopus)

• The impact of climate and antigenic evolution on seasonal influenza virus epidemics in Australia

  Lam, E. K. S., Morris, D. H., Hurt, A. C., Barr, I. G. & Russell, C. A., 1 Dec 2020, In: Nature communications. 11, 1, 2741.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  14 Citations (Scopus)

• Yield of Screening for COVID-19 in Asymptomatic Patients Before Elective or Emergency Surgery Using Chest CT and RT-PCR (SCOUT): Multicenter Study

  SCOUT study group, 1 Dec 2020, In: Annals of surgery. 272, 6, p. 919-924 6 p.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  37 Citations (Scopus)
• 2019

  Genetic diversity and host adaptation of avian H5N1 influenza viruses during human infection

  Welkers, M. R. A., Pawestri, H. A., Fonville, J. M., Sampurno, O. D., Pater, M., Holwerda, M., Han, A. X., Russell, C. A., Jeeninga, R. E., Setiawaty, V., de Jong, M. D. & Eggink, D., 1 Jan 2019, In: Emerging Microbes & Infections. 8, 1, p. 262-271

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  22 Citations (Scopus)

• Incomplete genetic reconstitution of B cell pools contributes to prolonged immunosuppression after measles

  Petrova, V. N., Sawatsky, B., Han, A. X., Laksono, B. M., Walz, L., Parker, E., Pieper, K., Anderson, C. A., de Vries, R. D., Lanzavecchia, A., Kellam, P., von Messling, V., de Swart, R. L. & Russell, C. A., 2019, In: Science immunology. 4, 41

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  84 Citations (Scopus)

• Individual immune selection pressure has limited impact on seasonal influenza virus evolution

  Han, A. X., Maurer-Stroh, S. & Russell, C. A., 2019, In: Nature ecology & evolution. 3, 2, p. 302-311

  Research output: Contribution to journal › Article › Academic › peer-review
  16 Citations (Scopus)

• Influenza A Hemagglutinin Passage Bias Sites and Host Specificity Mutations

  Lee, R. T. C., Chang, H-H., Russell, C. A., Lipsitch, M. & Maurer-Stroh, S., 22 Aug 2019, In: Cells. 8, 9

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  4 Citations (Scopus)

• Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)

  Han, A. X., Parker, E., Scholer, F., Maurer-Stroh, S. & Russell, C. A., 2019, In: Molecular Biology and evolution. 36, 7, p. 1580-1595

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  34 Citations (Scopus)
• 2018

  Combined influence of B-cell receptor rearrangement and somatic hypermutation on B-cell class-switch fate in health and in chronic lymphocytic leukemia

  Petrova, V. N., Muir, L., McKay, P. F., Vassiliou, G. S., Smith, K. G. C., Lyons, P. A., Russell, C. A., Anderson, C. A., Kellam, P. & Bashford-Rogers, R. J. M., 2018, In: Frontiers in immunology. 9, AUG, 1784.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  20 Citations (Scopus)

• The evolution of seasonal influenza viruses

  Petrova, V. N. & Russell, C. A., 2018, In: Nature reviews. Microbiology. 16, 1, p. 47-+

  Research output: Contribution to journal › Review article › Academic › peer-review
  412 Citations (Scopus)

• The geographic variation of surveillance and zoonotic spillover potential of influenza viruses in domestic poultry and swine

  Berger, K. A., Pigott, D. M., Tomlinson, F., Godding, D., Maurer-Stroh, S., Taye, B., Sirota, F. L., Han, A., Lee, R. T. C., Gunalan, V., Eisenhaber, F., Hay, S. I. & Russell, C. A., 2018, In: Open forum infectious diseases. 5, 12

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  5 Citations (Scopus)
• 2017

  Genome-wide evolutionary dynamics of influenza B viruses on a global scale

  Langat, P., Raghwani, J., Dudas, G., Bowden, T. A., Edwards, S., Gall, A., Bedford, T., Rambaut, A., Daniels, R. S., Russell, C. A., Pybus, O. G., McCauley, J., Kellam, P. & Watson, S. J., Dec 2017, In: PLoS pathogens. 13, 12, p. e1006749

  Research output: Contribution to journal › Article › Academic › peer-review

• Infectious disease management must be evolutionary

  Russell, C. A. & de Jong, M. D., 2017, In: Nature ecology & evolution. 1, 8, p. 1053-1055

  Research output: Contribution to journal › Editorial › Academic › peer-review
  5 Citations (Scopus)
• 2016

  The global antigenic diversity of swine influenza A viruses

  AUTHOR GROUP, 2016, In: eLife. 5, p. e12217

  Research output: Contribution to journal › Article › Academic › peer-review
  131 Citations (Scopus)
• 2010

  Virulence-Associated Substitution D222G in the Hemagglutinin of 2009 Pandemic Influenza A(H1N1) Virus Affects Receptor Binding

  Chutinimitkul, S., Herfst, S., Steel, J., Lowen, A. C., Ye, J., van Riel, D., Schrauwen, E. J. A., Bestebroer, T. M., Koel, B., Burke, D. F., Sutherland-Cash, K. H., Whittleston, C. S., Russell, C. A., Wales, D. J., Smith, D. J., Jonges, M., Meijer, A., Koopmans, M., Rimmelzwaan, G. F., Kuiken, T., & 4 othersOsterhaus, A. D. M. E., García-Sastre, A., Perez, D. R. & Fouchier, R. A. M., 2010, In: Journal of Virology. 84, 22, p. 11802-11813

  Research output: Contribution to journal › Article › Academic › peer-review
  183 Citations (Scopus)