Research output per year
Research output per year
Personal profile
Education/Academic qualification
PhD, Identification of Prokaryotic Species and Exploration of the Human Gut Microbiome and the Arctic Ocean Metabolism Using Metagenomics, European Molecular Biology Laboratory
1 May 2009 → 22 Jul 2013
Award Date: 22 Jul 2013
Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
Research output
- 14 Article
-
Disentangling top-down drivers of mortality underlying diel population dynamics of Prochlorococcus in the North Pacific Subtropical Gyre
Beckett, S. J., Demory, D., Coenen, A. R., Casey, J. R., Dugenne, M., Follett, C. L., Connell, P., Carlson, M. C. G., Hu, S. K., Wilson, S. T., Muratore, D., Rodriguez-Gonzalez, R. A., Peng, S., Becker, K. W., Mende, D. R., Armbrust, E. V., Caron, D. A., Lindell, D., White, A. E., Ribalet, F., & 1 others, 1 Dec 2024, In: Nature communications. 15, 1, 2105.Research output: Contribution to journal › Article › Academic › peer-review
Open Access -
SPIRE: a Searchable, Planetary-scale mIcrobiome REsource
Schmidt, T. S. B., Fullam, A., Ferretti, P., Orakov, A., Maistrenko, O. M., Ruscheweyh, H-J., Letunic, I., Duan, Y., van Rossum, T., Sunagawa, S., Mende, D. R., Finn, R. D., Kuhn, M., Pedro Coelho, L. & Bork, P., 5 Jan 2024, In: Nucleic Acids Research. 52, D1, p. D777-D783Research output: Contribution to journal › Article › Academic › peer-review
Open Access2 Citations (Scopus) -
eggNOG 6.0: enabling comparative genomics across 12 535 organisms
Hernández-Plaza, A., Szklarczyk, D., Botas, J., Cantalapiedra, C. P., Giner-Lamia, J., Mende, D. R., Kirsch, R., Rattei, T., Letunic, I., Jensen, L. J., Bork, P., von Mering, C. & Huerta-Cepas, J., 6 Jan 2023, In: Nucleic Acids Research. 51, 1 D, p. D389-D394Research output: Contribution to journal › Article › Academic › peer-review
Open Access47 Citations (Scopus) -
Impact of antibiotics on gut microbiome composition and resistome in the first years of life in low- to middle-income countries: A systematic review
Luchen, C. C., Chibuye, M., Spijker, R., Simuyandi, M., Chisenga, C., Bosomprah, S., Chilengi, R., Schultsz, C., Mende, D. R. & Harris, V. C., 1 Jun 2023, In: PLoS medicine. 20, 6, p. e1004235 e1004235.Research output: Contribution to journal › Article › Academic › peer-review
Open Access4 Citations (Scopus) -
proGenomes3: approaching one million accurately and consistently annotated high-quality prokaryotic genomes
Fullam, A., Letunic, I., Schmidt, T. S. B., Ducarmon, Q. R., Karcher, N., Khedkar, S., Kuhn, M., Larralde, M., Maistrenko, O. M., Malfertheiner, L., Milanese, A., Rodrigues, J. F. M., Sanchis-López, C., Schudoma, C., Szklarczyk, D., Sunagawa, S., Zeller, G., Huerta-Cepas, J., von Mering, C., Bork, P., & 1 others, 6 Jan 2023, In: Nucleic Acids Research. 51, D1, p. D760-D766Research output: Contribution to journal › Article › Academic › peer-review
Open Access10 Citations (Scopus)