Assessment of concordance between fresh-frozen and formalin-fixed paraffin embedded tumor DNA methylation using a targeted sequencing approach

Bruce Moran; Sudipto Das; Dominiek Smeets; Gillian Peutman; Rut Klinger; Bozena Fender; Kate Connor; Matthias P Ebert; Timo Gaiser; Jochen H M Prehn; Orna Bacon; Elaine W Kay; Bryan Hennessy; Verena Murphy; Bauke Ylstra; NCT van Grieken; Diether Lambrechts; Annette T Byrne; William M. Gallagher; Darran P. O'Connor

doi:https://doi.org/10.18632/oncotarget.18296

Assessment of concordance between fresh-frozen and formalin-fixed paraffin embedded tumor DNA methylation using a targeted sequencing approach

Bruce Moran, Sudipto Das, Dominiek Smeets, Gillian Peutman, Rut Klinger, Bozena Fender, Kate Connor, Matthias P Ebert, Timo Gaiser, Jochen H M Prehn, Orna Bacon, Elaine W Kay, Bryan Hennessy, Verena Murphy, Bauke Ylstra, NCT van Grieken, Diether Lambrechts, Annette T Byrne, William M. Gallagher, Darran P. O'Connor

Research output: Contribution to journal › Article › Academic › peer-review

8 Citations (Scopus)

Original language	English
Pages (from-to)	48126-48137
Number of pages	12
Journal	Oncotarget
Volume	8
Issue number	29
DOIs	https://doi.org/10.18632/oncotarget.18296
Publication status	Published - 1 Jan 2017

Keywords

Epigenetics
FFPE
Methylation
Targeted bisulfite sequencing
Tumor preservation

Access to Document

https://doi.org/10.18632/oncotarget.18296

Cite this

Moran, B., Das, S., Smeets, D., Peutman, G., Klinger, R., Fender, B., Connor, K., Ebert, M. P., Gaiser, T., Prehn, J. H. M., Bacon, O., Kay, E. W., Hennessy, B., Murphy, V., Ylstra, B., van Grieken, NCT., Lambrechts, D., Byrne, A. T., Gallagher, W. M., & O'Connor, D. P. (2017). Assessment of concordance between fresh-frozen and formalin-fixed paraffin embedded tumor DNA methylation using a targeted sequencing approach. Oncotarget, 8(29), 48126-48137. https://doi.org/10.18632/oncotarget.18296

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author = "Bruce Moran and Sudipto Das and Dominiek Smeets and Gillian Peutman and Rut Klinger and Bozena Fender and Kate Connor and Ebert, {Matthias P} and Timo Gaiser and Prehn, {Jochen H M} and Orna Bacon and Kay, {Elaine W} and Bryan Hennessy and Verena Murphy and Bauke Ylstra and {van Grieken}, NCT and Diether Lambrechts and Byrne, {Annette T} and Gallagher, {William M.} and O'Connor, {Darran P.}",

year = "2017",

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Moran, B, Das, S, Smeets, D, Peutman, G, Klinger, R, Fender, B, Connor, K, Ebert, MP, Gaiser, T, Prehn, JHM, Bacon, O, Kay, EW, Hennessy, B, Murphy, V, Ylstra, B , van Grieken, NCT, Lambrechts, D, Byrne, AT, Gallagher, WM & O'Connor, DP 2017, 'Assessment of concordance between fresh-frozen and formalin-fixed paraffin embedded tumor DNA methylation using a targeted sequencing approach', Oncotarget, vol. 8, no. 29, pp. 48126-48137. https://doi.org/10.18632/oncotarget.18296

TY - JOUR

T1 - Assessment of concordance between fresh-frozen and formalin-fixed paraffin embedded tumor DNA methylation using a targeted sequencing approach

AU - Moran, Bruce

AU - Das, Sudipto

AU - Smeets, Dominiek

AU - Peutman, Gillian

AU - Klinger, Rut

AU - Fender, Bozena

AU - Connor, Kate

AU - Ebert, Matthias P

AU - Gaiser, Timo

AU - Prehn, Jochen H M

AU - Bacon, Orna

AU - Kay, Elaine W

AU - Hennessy, Bryan

AU - Murphy, Verena

AU - Ylstra, Bauke

AU - van Grieken, NCT

AU - Lambrechts, Diether

AU - Byrne, Annette T

AU - Gallagher, William M.

AU - O'Connor, Darran P.

PY - 2017/1/1

Y1 - 2017/1/1

KW - Epigenetics

KW - FFPE

KW - Methylation

KW - Targeted bisulfite sequencing

KW - Tumor preservation

U2 - https://doi.org/10.18632/oncotarget.18296

DO - https://doi.org/10.18632/oncotarget.18296

M3 - Article

C2 - 28611295

SN - 1949-2553

VL - 8

SP - 48126

EP - 48137

JO - Oncotarget

JF - Oncotarget

IS - 29

ER -