@inproceedings{98d599cced3d43bc8e8d6133f878944c,
title = "Dilated convolutional neural networks for cardiovascular MR segmentation in congenital heart disease",
abstract = "We propose an automatic method using dilated convolutional neural networks (CNNs) for segmentation of the myocardium and blood pool in cardiovascular MR (CMR) of patients with congenital heart disease (CHD). Ten training and ten test CMR scans cropped to an ROI around the heart were provided in the MICCAI 2016 HVSMR challenge. A dilated CNNwith a receptive field of 131×131 voxels was trained for myocardium and blood pool segmentation in axial, sagittal and coronal image slices. Performance was evaluated within the HVSMR challenge. Automatic segmentation of the test scans resulted in Dice indices of 0.80 ± 0.06 and 0.93 ± 0.02, average distances to boundaries of 0.96 ± 0.31 and 0.89 ± 0.24 mm, and Hausdorff distances of 6.13 ± 3.76 and 7.07 ± 3.01mm for the myocardium and blood pool, respectively. Segmentation took 41.5 ± 14.7 s per scan. In conclusion, dilated CNNs trained on a small set of CMR images of CHD patients showing large anatomical variability provide accurate myocardium and blood pool segmentations.",
author = "Wolterink, {Jelmer M.} and Tim Leiner and Viergever, {Max A.} and Ivana I{\v s}gum",
year = "2017",
doi = "https://doi.org/10.1007/978-3-319-52280-7_9",
language = "English",
isbn = "9783319522791",
volume = "10129 LNCS",
series = "Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)",
publisher = "Springer Verlag",
pages = "95--102",
editor = "Zuluaga, {Maria A.} and Moghari, {Mehdi H.} and Pace, {Danielle F.} and Bernhard Kainz and Kanwal Bhatia",
booktitle = "Reconstruction, Segmentation, and Analysis of Medical Images - 1st International Workshops, RAMBO 2016 and HVSMR 2016 Held in Conjunction with MICCAI 2016, Revised Selected Papers",
note = "1st International Workshops on Reconstruction and Analysis of Moving Body Organs, RAMBO 2016 and 1st International Workshops on Whole-Heart and Great Vessel Segmentation from 3D Cardiovascular MRI in Congenital Heart Disease, HVSMR 2016 Held in Conjunct... ; Conference date: 17-10-2016 Through 21-10-2016",
}