Marcel Jonges

Research output

Research output per year 2020 2021 2022 2024

• 16 Article

Research output per year

Research output per year

Search results

• 2024

  DengueSeq: a pan-serotype whole genome amplicon sequencing protocol for dengue virus

  Vogels, C. B. F., Hill, V., Breban, M. I., Chaguza, C., Paul, L. M., Sodeinde, A., Taylor-Salmon, E., Ott, I. M., Petrone, M. E., Dijk, D., Jonges, M., Welkers, M. R. A., Locksmith, T., Dong, Y., Tarigopula, N., Tekin, O., Schmedes, S., Bunch, S., Cano, N., Jaber, R., & 11 othersPanzera, C., Stryker, I., Vergara, J., Zimler, R., Kopp, E., Heberlein, L., Herzog, K. S., Fauver, J. R., Morrison, A. M., Michael, S. F. & Grubaugh, N. D., 1 Dec 2024, In: BMC Genomics. 25, 1, 433.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
• 2023

  A comparison of five Illumina, Ion Torrent, and nanopore sequencing technology-based approaches for whole genome sequencing of SARS-CoV-2

  Carbo, E. C., Mourik, K., Boers, S. A., Munnink, B. O., Nieuwenhuijse, D., Jonges, M., Welkers, M. R. A., Matamoros, S., van Harinxma thoe Slooten, J., Kraakman, M. E. M., Karelioti, E., van der Meer, D., Veldkamp, K. E., Kroes, A. C. M., Sidorov, I. & de Vries, J. J. C., Jun 2023, In: European Journal of Clinical Microbiology and Infectious Diseases. 42, 6, p. 701-713 13 p.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  6 Citations (Scopus)

• External validation of the PAGE-B score for HCC risk prediction in people living with HIV/HBV coinfection

  ANRS CO3 Aquitaine Cohort, the Swiss HIV Cohort Study, EuroSIDA & ATHENA Observational Cohort Study, May 2023, In: Journal of Hepatology. 78, 5, p. 947-957 11 p.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  4 Citations (Scopus)

• Mpox outbreak among men who have sex with men in Amsterdam and Rotterdam, the Netherlands: no evidence for undetected transmission prior to May 2022, a retrospective study

  de Vries, H. J., Götz, H. M., Bruisten, S., van der Eijk, A. A., Prins, M., Oude Munnink, B. B., Welkers, M. R., Jonges, M., Molenkamp, R., Westerhuis, B. M., Schuele, L., Stam, A., Boter, M., Hoornenborg, E., Mulders, D., van den Lubben, M. & Koopmans, M., 17 Apr 2023, In: Euro surveillance. 28, 17

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  7 Citations (Scopus)
• 2022

  A highly virulent variant of HIV-1 circulating in the Netherlands

  Netherlands ATHENA HIV Observational Cohort, BEEHIVE Collaboration & Netherlands ATHENA HIV Observational Cohort†, 4 Feb 2022, In: Science. 375, 6580, p. 540-545 6 p., A30.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  31 Citations (Scopus)

• A single mRNA vaccine dose in COVID-19 patients boosts neutralizing antibodies against SARS-CoV-2 and variants of concern

  RECoVERED Study Group, 18 Jan 2022, In: Cell Reports Medicine. 3, 1, 100486.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  13 Citations (Scopus)

• Controlling a human parainfluenza virus-3 outbreak in a haematology ward in a tertiary hospital: the importance of screening strategy and molecular diagnostics in relation to clinical symptoms

  Iglόi, Z., van Loo, I. H. M., Demandt, A. M. P., Franssen, K., Jonges, M., van Gelder, M., Erkens-Hulshof, S. & van Alphen, L. B., 1 Aug 2022, In: Journal of Hospital Infection. 126, p. 56-63 8 p.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  4 Citations (Scopus)

• Development of Resistance-Associated Mutations after Sotrovimab Administration in High-risk Individuals Infected with the SARS-CoV-2 Omicron Variant

  Birnie, E., Biemond, J. J., Appelman, B., de Bree, G. J., Jonges, M., Welkers, M. R. A. & Wiersinga, W. J., 20 Sept 2022, In: JAMA. 328, 11, p. 1104-1107 4 p.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  25 Citations (Scopus)

• Epidemiologic and Genomic Analysis of SARS-CoV-2 Delta Variant Superspreading Event in Nightclub, the Netherlands, June 2021

  ARGOS consortium, 1 May 2022, In: Emerging infectious diseases. 28, 5, p. 1012-1016 5 p.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  6 Citations (Scopus)

• Paediatric monkeypox patient with unknown source of infection, the Netherlands, June 2022

  Tutu van Furth, A. M., van der Kuip, M., van Els, A. L., Fievez, L. C., van Rijckevorsel, G. G., van den Ouden, A., Jonges, M. & Welkers, M. R., 21 Jul 2022, In: Euro surveillance. 27, 29, pii=2200552.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  49 Citations (Scopus)

• Risk of SARS-CoV-2 transmission upon return to work in RNA-positive healthcare workers

  Kolodziej, L. M., Hordijk, S., Koopsen, J., Maas, J. J., Thung, H. T., Spijkerman, I. J. B., Jonges, M., Bomers, M. K., Sikkens, J. J., de Jong, M. D., Zonneveld, R. & Schinkel, J., 1 Jun 2022, In: Journal of Hospital Infection. 124, p. 72-78 7 p.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  4 Citations (Scopus)
• 2021

  HCV micro-elimination in individuals with HIV in the Netherlands 4 years after universal access to direct-acting antivirals: a retrospective cohort study

  ATHENA observational cohort, Feb 2021, In: The Lancet HIV. 8, 2, p. e96-e105

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  45 Citations (Scopus)

• Rapid reinfection with SARS-CoV-2 variant-of-concern Alpha detected in a nurse during an outbreak at a non-covid inpatient ward: lessons learned

  Koopsen, J., Dekker, M., Thung, P., Jonges, M., Vennema, H., Leenstra, T., Eggink, D., Welkers, M. R. A., Struijs, P. A. A., Reusken, C., van Mansfeld, R., de Jong, M. D., Schinkel, J. & Spijkerman, I. J. B., 1 Dec 2021, In: Antimicrobial resistance and infection control. 10, 1, 137.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  3 Citations (Scopus)

• Serologic Surveillance and Phylogenetic Analysis of SARS-CoV-2 Infection among Hospital Health Care Workers

  Sikkens, J. J., Buis, D. T. P., Peters, E. J. G., Dekker, M., Schinkel, M., Reijnders, T. D. Y., Schuurman, A. R., de Brabander, J., Lavell, A. H. A., Maas, J. J., Koopsen, J., Han, A. X., Russell, C. A., Schinkel, J., Jonges, M., Matamoros, S. B., Jurriaans, S., van Mansfeld, R., Wiersinga, W. J., Smulders, Y. M., & 2 othersde Jong, M. D. & Bomers, M. K., 28 Jul 2021, In: JAMA network open. 4, 7, p. e2118554 18554.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  27 Citations (Scopus)

• Simultaneous detection and ribotyping of Clostridioides difficile, and toxin gene detection directly on fecal samples

  van Rossen, T. M., van Prehn, J., Koek, A., Jonges, M., van Houdt, R., van Mansfeld, R., Kuijper, E. J., Vandenbroucke-Grauls, C. M. J. E. & Budding, A. E., 1 Dec 2021, In: Antimicrobial resistance and infection control. 10, 1, 23.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  4 Citations (Scopus)
• 2020

  Human immunodeficiency virus continuum of care in 11 european union countries at the end of 2016 overall and by key population: Have we made progress?

  European HIV Continuum of Care Working Group, 1 Dec 2020, In: Clinical Infectious Diseases. 71, 11, p. 2905-2916 12 p.

  Research output: Contribution to journal › Article › Academic › peer-review

  Open Access
  14 Citations (Scopus)