Projects per year
Personal profile
Research interests
Most of my research since my PhD in 2008 has focused on hepatitis C virus (HCV), which has resulted in a current productive research line, encompassing several aspects of HCV infection – from epidemiology to clinical and fundamental virological research - and which is embedded in a multidisciplinary network of institutional, national and international collaborations.
I have been involved in several phase 1 and 2 trials with protease inhibitors or other candidate drugs. These clinical trials led to several virological ancillary studies, styding HCV resistance to direct acting antivirals.
A second research topic has been the new HCV epidemic in HIV infected MSM. Together with Prof. Dr. Prins, from the Public Health Service from Amsterdam in 2008 we successfully applied for a grant from the AIDS Fund to start the MOSAIC cohort, a multicenter cohort with the objective to study the sequellae of acute Hepatitis C virus (HCV) infection in this patient group.An interesting novel observation within this cohort was the partial immunity we observed against reinfection with the same genotype. To investigate this further we started a collaboration with Prof. Spits and Dr. Beaumont from AIMM therapeutics, with the ultimate goal of developing monoclonal antibodies against HCV (funded by the dutch government)
To obtain a more comprehensive understanding of protective immunity against HCV, transcriptomics, innate immunity and T-cell responses in the same frequently exposed non-chronic drug users from the ACS will be studied by groups we collaborate with (the group o Dr. Boonstra from the Erasmus Medical Center in Rotterdam).
Besides the topics described above I also initiated and participated studies on the molecular epidemiology of HCV. Part of this work has been done in collaboration with Prof. Pybus from Oxford University and part with Dr. T van der Laar, from the Free University of Amsterdam.
specialisation
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
Collaborations and top research areas from the last five years
Projects
- 2 Active
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Schinkel J.: [NO DATA]
Ho, K., Merat, S., Newsum, A., Steba, G. & Schinkel, C.
26/05/2015 → …
Project: Research
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de Jong M.D.: Emerging Pathogens
de Jong, M., Mens, P., Molenkamp, R., Schinkel, C., Eggink, D., Hofstra, J., Koel, B., Matamoros, S., de Haan, K., Balraadjsing, P., Bruning, A., Cristella, C., Ginting, F., van Hattem, J., Hodiamont, C., Ho, K., Huis in 't Veld, R., Janes, V., Karelehto, S., Merat, S., Nguyen, V., Omardien, S., Pawestri, H., Riool, M., van Someren Greve, F., Sugianli, A., Welkers, M., Willemse, N., Zhang, X. & Cristello, C.
1/01/2013 → …
Project: Research
Research output
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Cross-genotype AR3-specific neutralizing antibodies confer long-term protection in injecting drug users after HCV clearance
Merat, S. J., Bru, C., van de Berg, D., Molenkamp, R., Tarr, A. W., Koekkoek, S., Kootstra, N. A., Prins, M., Ball, J. K., Bakker, A. Q., de Jong, M. D., Spits, H., Beaumont, T. & Schinkel, J., 1 Jul 2019, In: Journal of Hepatology. 71, 1, p. 14-24Research output: Contribution to journal › Article › Academic › peer-review
Open Access23 Citations (Scopus) -
Hepatitis C virus Broadly Neutralizing Monoclonal Antibodies Isolated 25 Years after Spontaneous Clearance
Merat, S. J., Molenkamp, R., Wagner, K., Koekkoek, S. M., van de Berg, D., Yasuda, E., Böhne, M., Claassen, Y. B., Grady, B. P., Prins, M., Bakker, A. Q., de Jong, M. D., Spits, H., Schinkel, J. & Beaumont, T., 2016, In: PLOS ONE. 11, 10, p. e0165047Research output: Contribution to journal › Article › Academic › peer-review
37 Citations (Scopus) -
Hepatitis C virus (HCV) antibody dynamics following acute HCV infection and reinfection among HIV-infected men who have sex with men
AUTHOR GROUP, 2014, In: Clinical Infectious Diseases. 59, 12, p. 1678-1685Research output: Contribution to journal › Article › Academic › peer-review
52 Citations (Scopus) -
Optimization of the pseudoparticle system for standardized assessments of neutralizing antibodies against hepatitis C virus
Chumbe, A., Urbanowicz, R. A., Sliepen, K., Koekkoek, S. M., Molenkamp, R., Tarr, A. W., Ball, J. K., Schinkel, J. & van Gils, M. J., 1 Nov 2022, In: Journal of general virology. 103, 11Research output: Contribution to journal › Article › Academic › peer-review
Open Access3 Citations (Scopus) -
Structure of the hepatitis C virus E1E2 glycoprotein complex
Torrents de la Peña, A., Sliepen, K., Eshun-Wilson, L., Newby, M. L., Allen, J. D., Zon, I., Koekkoek, S., Chumbe, A., Crispin, M., Schinkel, J., Lander, G. C., Sanders, R. W. & Ward, A. B., 21 Oct 2022, In: Science. 378, 6617, p. 263-269 7 p.Research output: Contribution to journal › Article › Academic › peer-review
25 Citations (Scopus)
Datasets
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Cryo-EM structure of full-length hepatitis C virus E1E2 glycoprotein in complex with AR4A, AT12009, and IGH505 Fabs
de la Peña, A. T. (Contributor), Sliepen, K. (Contributor), Eshun-Wilson, L. (Contributor), Newby, M. L. (Contributor), Allen, J. D. (Contributor), Zon, I. (Contributor), Koekkoek, S. (Contributor), Chumbe, A. (Contributor), Crispin, M. (Contributor), Schinkel, C. (Contributor), Lander, G. C. (Contributor), Sanders, R. (Contributor) & Ward, A. B. (Contributor), Protein Data Bank (PDB), 2 Nov 2022
DOI: 10.2210/pdb7T6X, https://www.wwpdb.org/pdb?id=pdb_00007t6x
Dataset